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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*31:01-B*39:01-C*08:03-DRB1*16:02-DQA1*05:05-DQB1*03:01 | Brazil Puyanawa | 5.92 | 150 | 10_52_S_53_5_W |
| 2 | A*02:06-B*39:01-DRB1*16:02 | Mexico Oaxaca Mixtec | 3.00 | 103 | 17_5_N_96_45_W |
| 3 | A*11:02-B*39:01-DRB1*16:02 | China Guangxi Region Maonan | 2.30 | 108 | 23_48_N_108_59_E |
| 4 | A*31:01-B*39:01-C*08:01-DRB1*16:02-DQA1*05:05-DQB1*03:01 | Brazil Puyanawa | 1.75 | 150 | 10_52_S_53_5_W |
| 5 | A*24:02-B*39:01-DRB1*16:02-DQB1*03:01 | Chile Mapuche | 1.54 | 66 | 37_48_S_73_23_W |
| 6 | A*02:01-B*39:01-DRB1*16:02:01-DQB1*03:01 | USA South Dakota Lakota Sioux | 1.40 | 302 | 44_30_N_100_0_W |
| 7 | A*02:01:01-B*39:01:01-C*07:01:01-DRB1*16:02:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 8 | A*68:01:01-B*39:01:01-C*07:01:01-DRB1*16:02:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 9 | A*24:02-B*39:01-DRB1*16:02-DQB1*03:01 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 10 | A*36-B*39:01-DRB1*16:02-DQB1*03:01 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 11 | A*68:01-B*39:01-DRB1*16:02-DQB1*03:02 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 12 | A*31:01-B*39:01-C*08:03-DRB1*16:02-DQA1*05:05-DQB1*03:02 | Brazil Puyanawa | 0.33 | 150 | 10_52_S_53_5_W |
| 13 | A*68:01-B*39:01-C*07:02-DRB1*16:02-DQA1*05:05-DQB1*03:01 | Brazil Puyanawa | 0.33 | 150 | 10_52_S_53_5_W |
| 14 | A*68:01-B*39:01-C*08:03-DRB1*16:02-DQA1*05:05-DQB1*03:01 | Brazil Puyanawa | 0.33 | 150 | 10_52_S_53_5_W |
| 15 | A*26:01-B*39:01-C*03:04-DRB1*16:02-DQB1*05:02 | Malaysia Peninsular Chinese | 0.26 | 194 | 3_9_N_101_57_E |
| 16 | A*26:01-B*39:01-C*12:03-DRB1*16:02 | Italy pop 5 | 0.10 | 975 | 45_28_N_9_11_E |
| 17 | A*01:01-B*39:01-C*07:02-DRB1*16:02-DQB1*03:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 18 | A*02:01-B*39:01-C*07:02-DRB1*16:02-DQB1*03:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 19 | A*24:02-B*39:01-C*07:02-DRB1*16:02-DQB1*05:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 20 | A*11:01-B*39:01-DRB1*16:02 | Hong Kong Chinese cord blood registry | 0.04 | 3,892 | 22_15_N_114_10_E |
| 21 | A*11:01-B*39:01-C*07:02-DRB1*16:02 | Germany DKMS - China minority | 0.04 | 1,282 | 48_31_N_9_3_E |
| 22 | A*11:02-B*39:01-C*07:02-DRB1*16:02 | Germany DKMS - China minority | 0.04 | 1,282 | 48_31_N_9_3_E |
| 23 | A*02:03-B*39:01-DRB1*16:02 | Hong Kong Chinese cord blood registry | 0.04 | 3,892 | 22_15_N_114_10_E |
| 24 | A*24:02-B*39:01-C*07:02-DRB1*16:02-DQB1*05:02 | Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, | 0.03 | 4,335 | 41_22_N_2_11_E |
| 25 | A*30:01:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DQB1*05:02:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 26 | A*11:01:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.03 | 5,266 | 22_25_N_114_17_E |
| 27 | A*26:01-B*39:01-DRB1*16:02 | Hong Kong Chinese cord blood registry | 0.02 | 3,892 | 22_15_N_114_10_E |
| 28 | A*02:01-B*39:01-C*07:02-DRB1*16:02 | Hong Kong Chinese BMDR | 0.02 | 7,595 | 22_15_N_114_10_E |
| 29 | A*33:03-B*39:01-C*12:04-DRB1*16:02-DQB1*03:01 | India East UCBB | 0.02 | 2,403 | 22_25_N_88_18_E |
| 30 | A*02:01-B*39:01-DRB1*16:02 | Hong Kong Chinese cord blood registry | 0.02 | 3,892 | 22_15_N_114_10_E |
| 31 | A*24:02:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 32 | A*26:01-B*39:01-C*07:02-DRB1*16:02 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 33 | A*03:01-B*39:01-C*12:03-DRB1*16:02-DQB1*05:02 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 34 | A*11:01-B*39:01-C*12:03-DRB1*16:02-DQB1*05:02 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 35 | A*24:02-B*39:01-C*06:02-DRB1*16:02-DQB1*05:02 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 36 | A*02:01:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 37 | A*26:01-B*39:01-DRB1*16:02 | Israel Kavkazi Jews | 0.01 | 2,840 | 32_10_N_34_52_E |
| 38 | A*11:02:01-B*39:01:01-C*07:02:01-DRB1*16:02:01-DPB1*13:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 39 | A*25:01-B*39:01-DRB1*16:02 | Israel USA Jews | 0.01 | 6,058 | 32_10_N_34_52_E |
| 40 | A*01:01-B*39:01-DRB1*16:02 | Israel Tunisia Jews | 0.01 | 9,070 | 32_10_N_34_52_E |
| 41 | A*02:01-B*39:01-C*07:02-DRB1*16:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
support@allelefrequencies.net